Publications
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29. Lo Vercio, L., Green, R. Robertson, S., Guo, S.H., Dauter, A., Marchini, M., Vidal-García, M., Zhao, X., Marcucio, R., Hallgrímsson, B., Forkert, N.D. Segmentation of Tissues and Proliferating Cells in Light-Sheet Microscopy Images using Convolutional Neural Networks. (in review). Available preprint here.
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28. Hirsch, N., Dahan, I., Dhaene, E., Avni, M., Vergult, S., Vidal-García, M., Magini, P., Graziano, C., Severi, G., Bonora, E., Nardone, A.M., Brancati, F., Fernandez-Jaen, A., Olson, R.J., Hallgrimsson, B., Birnbaum, R.Y. (2022) HDAC9 structural variants disrupting TWIST1 transcriptional regulation lead to craniofacial and limb malformations. Genome Research. (link)
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27. Hallgrímsson B., J. D. Aponte, M. Vidal-García, H. Richbourg, R. Green, N. M. Young, JJ. M. Cheverud, A. Calof, A. Lander, R. Marcucio. The Developmental Basis for Evolvability. In Evolvability: A unifying concept in evolutionary biology, edited by D. H. Thomas F. Hansen, Mihaela Pavlicev, and Christophe Pélabon. Boston, MA: MIT Press. (in press)
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26. Jay Devine, Marta Vidal-García, Wei Liu, Amanda Neves, Lucas D. Lo Vercio, Rebecca M. Green, Heather A. Richbourg, Marta Marchini, Colton M. Unger, Audrey C. Nickle, Bethany Radford, Nathan M. Young, Paula N. Gonzalez, Robert E. Schuler, Alejandro Bugacov, Campbell Rolian, Christopher J. Percival, Trevor Williams, Lee Niswander, Anne L. Calof, Arthur D. Lander, Axel Visel, Frank R. Jirik, James M. Cheverud, Ophir Klein, Ramon Y. Birnbaum, Amy E. Merrill, Rebecca R. Ackermann, Daniel Graf, Myriam Hemberger, Wendy Dean, Nils D. Forkert, Stephen A. Murray, Henrik Westerberg, Ralph S. Marcucio, Benedikt Hallgrímsson. (2022) MusMorph, a database of standarized mouse morphology data for morphometric meta-analyses. Scientific Data. (link)
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25. Christopher J Percival, Jay Devine, Chaudhry Raza Hassan, Marta Vidal‐García, Christopher J O'Connor‐Coates, Eva Zaffarini, Charles Roseman, David Katz, Benedikt Hallgrimsson. (2022) The genetic basis of neurocranial size and shape across varied lab mouse populations. Journal of Anatomy. (link)
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24. Andrej Čerňanský, Edward L Stanley, Juan D Daza, Arnau Bolet, J Salvador Arias, Aaron M Bauer, Marta Vidal-García, Joseph J Bevitt, Adolf M Peretti, Nyi Nyi Aung, Susan E Evans. (2022) A New Early Cretaceous lizard in Myanmar Amber with Exceptionally Preserved Integument. Scientific Reports. (link)
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23. Aponte, J.D, Katz, D.C., Roth, D.M., Vidal-García, M., Liu, W., Andrade, F., Roseman, C.C., Murray, S.A., Cheverud, J., Graf, D., Marcucio, R., Hallgrimsson, B. (2022) Shapes and Genescapes: Mapping Multivariate Phenotype-Biological Process Associations for Craniofacial Shape. eLife. (link)
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22. Semple, T.L., Vidal-García, M., Tatarnic, N., Peakall, R. (2021) Evolution of reproductive structures for in-flight mating in thynnine wasps (Hymenoptera: Thynnidae: Thynninae). Journal of Evolutionary Biology. (link)
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21. Bolet, A., Stanley, E., Daza, J.D., Arias, J.S., Čerňanský, A., Vidal-García, M., Bauer, A.M., Bevitt, J.J., Peretti, A., Evans, S.E., (2021) Unusual morphology in the mid-Cretaceous lizard Oculudentavis. Current Biology. (link)
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20. Roth, D.M., Baddam, P., Lin, H., Vidal-García, M., Aponte, J.D, De Souza, S-T., Godziuk, D., Watson, A.E., Footz, T., Schachter, N.F., Egan, S.E., Hallgrimsson, B., Graf, D., Voronova, A. (2021) The chromatin regulator Ankrd11 controls palate and cranial bone development. Frontiers in Cell and Developmental Biology. (link)
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19. Toussaint, N., Redhead, Y., Vidal-García, M., Lo Vercio, L., Liu, W., Fisher, E.M.C., Hallgrímsson, B., Tybulewicz, V.L.J, Schnabel, J.A., Green, J.B.A. (2021) A landmark-free morphometrics pipeline for high-resolution phenotyping: application to a mouse model of Down Syndrome. Development. 148: dev188631. (link)
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15. Evans, KM, Vidal-García, M, Tagliacollo, VA, Taylor, SJ, Fenolio, DB (2019) Bony Patchwork: Mosaic Patterns of Evolution in the Skull of Electric Fishes (Apteronotidae: Gymnotiformes) Integrative and Comparative Biology. (link)
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14. Attard, MRG, Sherratt, E., McDonald, P, Young, I, Vidal-García, M, Wroe, S (2018) A new, three-dimensional geometric morphometric approach to assess egg shape. PeerJ 6:e5052 (link)
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13. Vidal-García, M, Bandara, L, Keogh, JS (2018) ShapeRotator: an R tool for standarised rigid rotations of articulated Three-Dimensional structures with application for geometric morphometrics. Ecology and Evolution 8: 4669-4675 (link)
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12. Sherratt, E, Vidal-García, M, Anstis, M, Keogh, JS (2017) Adult frogs and their tadpoles have different macroevolutionary patterns across the Australian continent. Nature Ecology and Evolution 1: e1385 (link)
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11. Vidal-García, M, Keogh, JS (2017) Invasive cane toads are unique in shape but overlap in ecological niche compared to Australian native frogs. Ecology and Evolution 19: 7609-7619 (link)
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10. Hoops, D, Vidal-García, M, Ullmann, JFP, Janke, AL, Stait-Gardner, T, Duchene, D, Price, WS, Whiting, MJ, Keogh, JS (2017) Evidence for concerted and mosaic brain evolution in dragon lizards. Brains, Behaviour and Evolution. 90: 211-223 (link)
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9. Vidal-García, M, Keogh, JS (2017) Phylogenetic conservatism in skulls and evolutionary lability in limbs - morphological evolution across an ancient frog radiation is shaped by diet, locomotion and burrowing. BMC Evolutionary Biology. 17:165 (link)
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8. Hoops, D, Ullmann, JFP, Janke, AL, Vidal-García, M, Stait-Gardner, T, Dwihapsari, Y, Merkling, T, Price, WS, Endler, JA, Whiting, MJ, Keogh, JS (2016) Sexual selection predicts brain structure in dragon lizards. Journal of Evolutionary Biology. 30: 244-256(link)
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7. Openshaw, G, D'Amore, D, Vidal-García, M, Keogh, JS (2016) Combining geometric morphometric analyses of multiple 2D obervation views improves interpretation of evolutionary allometry and shape diversification in monitor lizard (Varanus) crania. Biological Journal of the Linnean Society. 120: 539-552 (link)
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6. Vidal-García, M, Keogh, JS (2015) Convergent evolution across the Australian continent: Ecotype diversification drives morphological convergence in two distantly related clades of Australian frogs. Journal of Evolutionary Biology. 28: 2136-2151 (link)
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5. Santos, X, Vidal-García, M, Brito, JC, Fahd, S, Llorente, GA, Martínez-Freiria, F, Parellada, X, Pleguezuelos, JM, Sillero, N (2014) Phylogeographic and environmental correlates support the cryptic function of the zigzag pattern in a European viper. Evolutionary Ecology. 28: 611-626 (link)
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4. Vidal-García, M, Byrne, PG, Roberts, JD, Keogh, JS (2014) The role of phylogeny and ecology in shaping morphology in 21 genera and 127 species of Australo-Papuan myobatrachid frogs. Journal of Evolutionary Biology. 27: 181-192 (link)
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3. Chernenko, A, Vidal-García, M, Helantera, H, Sundstrom, L (2013) Colony take-over and brood survival in temporary social parasites of the ant genus Formica. Behavioral Ecology and Sociobiology, 67(5): 727-735 (link)
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2. Llorente, GA, Vidal-García, M, Garriga, N, Carranza, S, Pleguezuelos, JM, Santos, S (2012) Lessons in a complex biogeographic scenario: morphological and molecular variation within Iberian Coronella austriaca (Reptilia: Colubridae). Biological Journal of the Linnean Society, 106: 210-223 (link)
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1. Santos, X, Feriche, M, León, R, Filippakopoulou, A, Vidal-García, M, Llorente, GA, Pleguezuelos, JM (2011). Tail breakage frequency as an indicator of predation risk for the aquatic snake Natrix maura. Amphibia-Reptilia, 32: 375-383 (link)
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R packages
Schliep K, Vidal-García, M, Biancani L, Henao Diaz L, Ada E, Solis-Lemus C. (2021). tanggle: Visualization of Phylogenetic Networks. R package available at Bioconductor, GitHub, website.
Vidal-García, M, Bandara, L, Keogh, JS. (2020). ShapeRotator: Standarised Rigid Rotations of Articulated Three-Dimensional Structures. R package version 0.1.0.CRAN.
Vidal-García, M, Bandara, L, Keogh, JS. (2020). ShapeRotator: Standarised Rigid Rotations of Articulated Three-Dimensional Structures. R package version 0.1.0.CRAN.
Submitted or in review
Schliep, K., Vidal-García, M., Biancanni, L, Henao-Díaz, F., Ada, E, Solís-Lemus, C. tanggle: an R package for the visualization of phylogenetic networks. (in review).
